PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS70109.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 232aa    MW: 25584 Da    PI: 8.3184
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS70109.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.69.4e-1376123454
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++  rE++RRdr+N++f eL  ll +    + +K +Ka+iL  Av+ +++L
  EPS70109.1  76 SKACREKQRRDRLNDKFMELAALLEPG---RPPKADKAAILVDAVRMLNQL 123
                 6789**********************8...89****************999 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.61872123IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.54E-1375141IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.56E-975128No hitNo description
PfamPF000102.8E-1076123IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.3E-1376145IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.2E-1078129IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    Send to blast
MVSQENTNWL CDYGIGDIHE NPGIANNPGF SWPAQGCNFS SNSGGELEGS LGDSDMQRET  60
GNKKRARPNT CASSSSKACR EKQRRDRLND KFMELAALLE PGRPPKADKA AILVDAVRML  120
NQLKGEAQKL KDSNLNLHEK IKELKAEKSE LREEKQRLKV EKENLEYKLK TMPQPNFMPA  180
PAAIPAAFAA QNQAGGEKLV PVISYPGVAM WQFMPPATVD TSQDHALRPP VA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011097928.11e-121PREDICTED: transcription factor ILR3-like
SwissprotQ9FH371e-107ILR3_ARATH; Transcription factor ILR3
TrEMBLS8CS791e-173S8CS79_9LAMI; Uncharacterized protein
STRINGPGSC0003DMT4000495921e-109(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9502482
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.14e-87bHLH family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]